miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|290498160|gb|GW627309.1|GW627309 GAGAAACACACTAACCAATAGGCAGTTTATTAAAATTATACATTGTTAAAATCTGTAGTGTGGTACAAATGATGAAAAGT
TGATACAATTTCTAACATATATTATAATTAGAGTTATTCATGTATGAAGGAAATGATCCTTTAATTATAATTTAGACTAA
AACAAATCTTAAATAATTAAGAACAATTTTTTTTGATTTAAATAGACCTTAAAAAGTCCACTGAATGTACAATATAAACG
TAGTTATATATTAATTTATAATGGGAGTCTATCCAGTCCAATGTCGAAACTCATGAGGTAGAGCTCCTCGACGAGGATAA
AATACGTGATCAGTAGAGTATGGGCTCATATTAATCAGTTTAGAAGTATATATGTCCGCAAATCGAAATAAGTTACGAGA
AAAGGCTGTTGGACTCACGTGAGTCCGAAAAATTGAACCGAAATAAGGATTGGACATTTTTTTCATTTTTAACGTGATAT
CGTTCAACTCATGAACCCATGACGTTATAACATCTTTACAATCCTCAGAGAGGTACATTTGATTGTTTTCAATCAAGCTC
TGTAGAGTAATAGACCAATTCTGATACTTTTTGAACTCCTCCTTATTAATTGTATCGATTTCATCTTCCAATTCTCGAAT
AATTGCAGCAGTTCTCCATCCATGGTGTAAAGTCAGATCCTCAAGATCTGAATATGGATGATCCCCAAAATATAAAACCC
TTAGACCTTCCCATTTCATCATTTTTTGAATAGTGTGCAGATTACCCCCTGA




Most similar to sp|Q6Q0N3|NT5D2_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q6Q0N3|NT5D2_RAT 5'-nucleotidase domain-containing protein 2
          Length = 553

 Score =  154 bits (388), Expect = 8e-37
 Identities = 77/163 (47%), Positives = 96/163 (58%)
 Frame = -1

Query: 766 GNLHTIQKMMKWEGLRVLYFGDHPYSDLEDLTLHHGWRTAAIIRELEDEIDTINKEEFKK 587
           GNL    ++ +W G RVLYFGDH YSDL DL L HGWRT AII ELE EI  IN E++  
Sbjct: 370 GNLFDFLRLTEWRGPRVLYFGDHLYSDLADLMLRHGWRTGAIIPELEREIRIINTEQYMH 429

Query: 586 YQNWSITLQSLIENNQMYLSEDCKDVITSWVHELNDITLKMKKMSNPYFGSIFRTHVSPT 407
              W   L  L+E  Q Y   + + V+ +W+ E  ++    K + N  FGSIFRT  +PT
Sbjct: 430 SLTWQQALTGLLERMQTYQDAESRQVLATWMKERQELRCITKALFNAQFGSIFRTFHNPT 489

Query: 406 AFSRNLFRFADIYTSKLINMSPYSTDHVFYPRRGALPHEFRHW 278
            FSR L RF+D+Y + L  +  YS D  FYPRR  L HE   W
Sbjct: 490 YFSRRLVRFSDLYMASLSCLLNYSVDFTFYPRRTPLQHEAPLW 532